CCUG


CCUG 57046 T Corynebacterium pyruviciproducens
Statues of names: Tong et al. 2010 - VP
NCBI  Euzeby   StrainInfo.net   Sequences   DNAb  DNAe   PLUS   MATCHf   SMATCHb  
ISOL: 2006; USA,CA,Los Angeles
SOURCE:Human abscess,groin
DEP:S.M.Finegold,Los Angeles,CA,USA 26 Sep 2008 <Olive View-UCLA Medical Center
OCC:06-17730;ATCC BAA-1742;WAL 19168;
DET:CCUG<Classical phenotyping,Api Coryne,Api Zym,CFA(FAME),16S rRNA,rpoB
CONDREM:Chocolate agar,CO2,37°C,2 days
RNASQ:FJ185225
DNASQ:FJ899747(rpoB)(strain 06-1773O)
LIT:Int J Syst Evol Microbiol 60:1135-1140,2009 [25293]
SUPPLY:DR

Corynebacterium pyruviciproducens  Tong et al. 2010
NCBI   Euzeby
APPR:VP ;NSP
VAL:60:1139*
LIT:Int J Syst Evol Microbiol 60:1135-1140,2010 [25293]
TYPE:CCUG 57046 06-17730;06-17730;ATCC BAA-1742;WAL 19168;
ETYM:pyruvicum=pyruvic acid;producens=producing;
SYN:'Khamis' Corynebacterium';Funke Corynebacterium parvulum
REL:Related to Corynebacterium glucuronolyticum
PHY:Gram-positive facultative anaerobic rods
RNA:FJ185225;FJ899747(rpoB);

Name literature references:

ND: 25293
AU:Tong J;Liu C;Summanen P;Xu H;Finegold SM;
SO:Int J Syst Evol Microbiol 60:1135-1140, 2010
TI:Corynebacterium pyruviciproducens sp. nov., a pyruvic acid producer
AB:Type strain is WAL 19168 = CCUG 57046 ATCC BAA-1742 GenBank FJ185225 strain 06-1773C) http://ijs.sgmjournals.org/cgi/reprint/60/5/1135.pdf
TA:Corynebacterium pyruviciproducens

Strain literature references:

ND: 25293
AU:Tong J;Liu C;Summanen P;Xu H;Finegold SM;
SO:Int J Syst Evol Microbiol 60:1135-1140, 2010
TI:Corynebacterium pyruviciproducens sp. nov., a pyruvic acid producer
AB:Type strain is WAL 19168 = CCUG 57046 ATCC BAA-1742 GenBank FJ185225 strain 06-1773C) http://ijs.sgmjournals.org/cgi/reprint/60/5/1135.pdf
TA:Corynebacterium pyruviciproducens


Phenotypic features in COX of CCUG 57046
Tests CAT40 211 55 551 3531 111
Api CORYNE151 151 111 111 524 141 414
Tests FERM555 111515 1 1115 0000000
Tests OLE1111 11 1111 113 111 111 111
Api ZYM11241 31111 12114 11111

16S rDNA sequence in SQX of CCUG 57046   
CCUG 57046
Taxon Corynebacterium pyruviciproducens
Seqsim 1 99% (1408/1409) gb FJ185225 GI:223951463 Corynebacterium sp 06-1773C
Seqsim 2 99% (1401/1410) gb AY581886 GI:50898060 Corynebacterium sp. 31595
Seqsim 3 95% (1348/1405) emb X86688 GI:794031 Corynebacterium glucuronolyticu
Litref 1 Tong J;Liu C;Xu H;Finegold SM;Los Angeles,CA,USA
Litref 2 Khamis A;La Scola B;Marseille,France
Litref 3 Miah A;Hutson RA;Collins MD;Reading,UK
Taxrem 1 06-1773C = CCUG 57046 T - 04-SEP-2008 - IJSEM 59 xxxx,2009 [25293]
Taxrem 2 31595 - 24-MAR-2004 - JCM 43 1934-1936,2004 [22014]
Taxrem 3 GF 838 = DSM 44120 - 26-APR-1995 -
Lab Paula Summanen,Los Angeles,CA,USA - 06-17730
Date 20090226
Method 16S rRNA
1- 50 ACGCTGGCGG CGTGCTTAAC ACATGCAAGT CGAACGGAAA GGCCTCAGCT
51- 100 TGCGGGGTGC TCGAGTGGCG AACGGGTGAG TAACACGTAG GTGATCTGCC
101- 150 TTTCACTTCG GGATAAGCTT GGGAAACTGG GTCTAATACC GGATATTCAC
151- 200 TATGCCGTGG TTGGTGTGGT GGAAAGCTTT TGCGGTGGGA GATGAGCTTG
201- 250 CGGCCTATCA GCTTGTTGGT GGGGTAATGG CCTACCAAGG CGGCGACGGG
251- 300 TAGCCGGCCT GAGAGGGTGT GCGGCCACAT TGGGACTGAG ATACGGCCCA
301- 350 GACTCCTACG GGAGGCAGCA GTGGGGAATT TTGCACAATG GGCGGAAGCC
351- 400 TGATGCAGCG ACGCCGTGTG GGGGATGAAG GCCTTCGGGT TGTAAACTCC
401- 450 CTTTCGTCAG GACGAAGTTT GTTTGACGGT ACCTGGATAA GAAGCACCGG
451- 500 CTAACTACGT GCCAGCAGCC GCGGTAATAC GTAGGGTGCG AGCGTTGTCC
501- 550 GGATTTACTG GGCGTAAAGG GCTCGTAGGT GGTGTGTTGC GTCGTCTGTG
551- 600 TAATCCAGGG GCTTAACTTT TGGTTGGCAG GCGATACGGG CATTGCTTGA
601- 650 GTGCTGTAGG GGAGACTGGA ATTCCTGGTG TAGCGGTGAA ATGCGCAGAT
651- 700 ATCAGGAGGA ACACCGATGG CGAAGGCAGG TCTCTGGGCA GTTACTGACG
701- 750 CTGAGGAGCG AGAGCATGGG TAGCGAACAG GATTAGATAC CCTGGTAGTC
751- 800 TATGCTGTAA ACGGTGGGCG CTAGGTGTGA GCCTCTTCCA CGGGGTTTGT
801- 850 GCCGTAGCTA ACGCTTTAAG CGCCCCGCCT GGGGAGTACG GCCGCAAGGC
851- 900 TAAAACTCAA AGGAATTGAC GGGGGCCCGC ACAAGCGGCG GAGCATGTGG
901- 950 ATTAATTCGA TGCAACGCGA AGAACCTTAC CTGGGCTTGA CATAGGCAGG
951- 1000 ATGGGCGCAG AGATGTGTCG TCCCTTTGTG GTCTGTTTAC AGGTGGTGCA
1001- 1050 TGGTTGTCGT CAGCTCGTGT CGTGAGATGT TGGGTTAAGT CCCGCAACGA
1051- 1100 GCGCAACCCT TGTCTTATGT TGCCAGCACG TTGTGGTGGG GACTCGTGAG
1101- 1150 AGACTGCCGG GGTTAACTCG GAGGAAGGTG GGGATGACGT CAAATCATCA
1151- 1200 TGCCCCTTAT GTCCAGGGCT TCACACATGC TACAATGGTT GGTACAGTGC
1201- 1250 GTGAGCAACA TCGTGAGGTG GAGCTAATCG CTAAAGCCAG TCTCAGTTCG
1251- 1300 GATTGGGGTC TGCAACTCGA CCTCATGAAG TCGGAGTCGC TAGTAATCGC
1301- 1350 AGATCAGCAG TGCTGCGGTG AATACGTTCC CGGGCCTTGT ACACACCGCC
1351- 1400 CGTCACGTCA TGAAAGTTGG TAACACCCGA AGCCCAtGGC CTAACCGGTT
1401- 1450 TTGCCGGG


ND: 25293
AU:Tong J;Liu C;Summanen P;Xu H;Finegold SM;
SO:Int J Syst Evol Microbiol 60:1135-1140, 2010
TI:Corynebacterium pyruviciproducens sp. nov., a pyruvic acid producer
AB:Type strain is WAL 19168 = CCUG 57046 ATCC BAA-1742 GenBank FJ185225 strain 06-1773C) http://ijs.sgmjournals.org/cgi/reprint/60/5/1135.pdf
TA:Corynebacterium pyruviciproducens

ND: 22014
AU:Khamis A;Raoult D;La Scola B;
SO:J Clin Microbiol 43:1934-1936, 2005
TI:Comparison between rpoB and 16S rRNA gene sequencing for molecular identification of 168 clinical isolates of Corynebacterium
AB: http://jcm.asm.org/cgi/reprint/43/4/1934
TA:Corynebacterium;

16S rDNA sequence in SQX of CCUG 57046   FASTA
CCUG 57046 b
Taxon Corynebacterium pyruviciproducens
Seqsim 1 100% (417/417) gb FJ185225 GI:223951463 Corynebacterium sp. 06-1773C
Seqsim 2 98% (415/422) gb AY581886 GI:50898060 Corynebacterium sp. 31595
Seqsim 3
Litref 1 Tong J;Liu C;Xu H;Finegold SM;Los Angeles,CA,USA
Litref 2 Khamis A;Raoult D;La Scola B;Marseille,France
Litref 3
Taxrem 1 06-1773C = CCUG 57046 - 04-SEP-2008 - IJSEM 59 xxxx,2009 [25293]
Taxrem 2 31595 = CCUG 49272 - 24-MAR-2004 - JCM 43 1934,2005 [22014]
Taxrem 3
Lab S.Wernersson & S.Jensie Markopoulos,CCUG,Göteborg,Sweden
Date 20090320
Method 16S rRNA gene 27-453;Forward (5'->3'),16R518;
1- 50 GATGAACGCT GGCGGCGTGC TTAACACATG CAAGTCGAAC GGAAAGGCCT
51- 100 CAGCTTGCTG GGGTGCTCGA GTGGCGAACG GGTGAGTAAC ACGTAGGTGA
101- 150 TCTGCCTTTC ACTTCGGGAT AAGCTTGGGA AACTGGGTCT AATACCGGAT
151- 200 ATTCACTATG CCGTGGTTGG TGTGGTGGAA AGCTTTTGCG GTGGGAGATG
201- 250 AGCTTGCGGC CTATCAGCTT GTTGGTGGGG TAATGGCCTA CCAAGGCGGC
251- 300 GACGGGTAGC CGGCCTGAGA GGGTGTGCGG CCACATTGGG ACTGAGATAC
301- 350 GGCCCAGACT CCTACGGGAG GCAGCAGTGG GGAATTTTGC ACAATGGGCG
351- 400 GAAGCCTGAT GCAGCGACGC CGTGTGGGGG ATGAAGGCCT TCGGGTTGTA
401- 450 AAACTCCTTT GTCAGGGACG AA


ND: 25293
AU:Tong J;Liu C;Summanen P;Xu H;Finegold SM;
SO:Int J Syst Evol Microbiol 60:1135-1140, 2010
TI:Corynebacterium pyruviciproducens sp. nov., a pyruvic acid producer
AB:Type strain is WAL 19168 = CCUG 57046 ATCC BAA-1742 GenBank FJ185225 strain 06-1773C) http://ijs.sgmjournals.org/cgi/reprint/60/5/1135.pdf
TA:Corynebacterium pyruviciproducens

ND: 22014
AU:Khamis A;Raoult D;La Scola B;
SO:J Clin Microbiol 43:1934-1936, 2005
TI:Comparison between rpoB and 16S rRNA gene sequencing for molecular identification of 168 clinical isolates of Corynebacterium
AB: http://jcm.asm.org/cgi/reprint/43/4/1934
TA:Corynebacterium;

16S rDNA sequence in SQX of CCUG 57046   FASTA
CCUG 57046 e
Taxon Corynebacterium pyruviciproducens
Seqsim 1
Seqsim 2 99% (398/402) gb AY581878 GI:51103940 Corynebacterium sp. 31595
Seqsim 3 90% (474/522) gb AY492256 GI:46360969 Corynebact. glucuronolyticum
Litref 1
Litref 2 Khamis A;Raoult D;La Scola B;Marseille,France
Litref 3 as 2) above
Taxrem 1
Taxrem 2 31595 = CCUG 49272 - 24-MAR-2004 - JCM 43 1934-1936,2005 [22014]
Taxrem 3 CIP 104577 CCUG 35055 T - 01-DEC-2003 - JCM 42 3925,2004 [17716]
Lab S.Wernersson & S.Jensie Markopoulos,CCUG,Göteborg,Sweden
Date 20090321
Method rpoB - Cor-rpoB-R3130,Cor-rpoB-F2625
1- 50 CTCGCCGGCC GCCACGGCAA CAAGGGTGTT GTGGGCAAGA TCCTGCCGCA
51- 100 GGAAGACATG CCGTTCATGG AGGACGGTAC CCCGATCGAT ATCATCCTCA
101- 150 ACACACACGG TGTGCCGCGT CGTATGAATA TCGGTCAGGT GCTCGAAGTT
151- 200 CACCTCGGCT GGCTGGCTAA GTCCGGCTGG GCCATCGAGG GTGACCCGGA
201- 250 TTGGGCCAAG CGTATTCCGG ACGATCTGCG TGAGGTTCCG CCGAACTCGC
251- 300 TTCTGGCTAC CCCGGTGTTC GACGGTGCCA CCAACGAGGA GATCGAGGGT
301- 350 CTGCTCGGCT CCACGTTGCC CGACCGCGAT GGCAACCGGC TGGTTGATAA
351- 400 GTTCGGTAAG GCCAAGCTTT TCGACGGTCG GTCCGGCGAG CCGTTCAAGT
401- 450 TACCCGGTGT TGTCGGTGAG AAGTACATGC TCAAGCTGCA CCACCTCGTG
451- 500 GATGAGAAGA TTCACGCACG TTCCACTGGC CCGTACTCCA TGATTACCCA
501- 550 GCAGCCGCTG GGTGGTAAGG CA


ND: 22014
AU:Khamis A;Raoult D;La Scola B;
SO:J Clin Microbiol 43:1934-1936, 2005
TI:Comparison between rpoB and 16S rRNA gene sequencing for molecular identification of 168 clinical isolates of Corynebacterium
AB: http://jcm.asm.org/cgi/reprint/43/4/1934
TA:Corynebacterium;

ND: 17716
AU:Khamis A;Raoult D;La Scola B;
SO:J Clin Microbiol 42:3925-3931, 2004
TI:rpoB gene sequencing for identification of Corynebacterium species
TA:Corynebacterium;

CCUG - Fatty Acid profile - CFA(FAME)  REPORT 
-------------------------------------------------------------------------------------------------------------------
Strain : CCUG 57046 #T Taxon : Corynebacterium pyruviciproducens
Date:081016
Remarks:Chocolate agar,CO2,37°C
-------------------------------------------------------------------------------------------------------------------
PEAK RT   ECL     %   Abbreviation Fatty Acid
046 7.353   14.000   1.7   14:0
082 10.276   15.819   1.6   16:1 w7c
086 10.580   16.000   30.4   16:0
125 13.596   17.724   25.6   18:2 w6,9c/18:0 ANTE
126 13.675   17.769   32.1   18:1 w9c
131 14.083   18.000   8.7   18:0
-------------------------------------------------------------------------------------------------------------------
Sum:         100  
-------------------------------------------------------------------------------------------------------------------
 
CCUG, Department of Clinical Bacteriology
Curator: Prof. Dr. E.R.B. Moore
University of Göteborg, Mikrobiologen,
Guldhedsgatan 10, SE-413 46 Göteborg
Box 7193, SE-402 34 Göteborg, Sweden
Org.no./VAT no.:SE 202 100 315 301 		Orders:
E.R.B.Moore:
Enquiries:
Lab@ccug.se
E. Falsen:
 order@domain
curator@domain
info@domain
lab@domain


   Fax orders:
Tel curator:
Fax:
Tel lab:
Domain =
 +46 31  82 96 17
+46 31 342 4696
+46 31  82 96 17
+46 31 342 4702
ccug.se