CCUG


CCUG 581 T Arthrobacter globiformis
Statues of names: (Conn 1928) Conn and Dimmick 1947 - AL
NCBI  Euzeby   StrainInfo.net   Sequences  
DEP:T.Rosswall,BI,Uppsala,Sweden 17 Oct 1969 <ATCC<N.R.Smith<H.J.Conn
OCC:Uppsala B 49;N.R.Smith 168;ATCC 8010;ICPB 3434;NCIB 8907
CHREM:Fatty acid profile fits Kocuria varians
LIT:IJSB 30:253,1980
SUPPLY:DR
REM:NAMCH:Smith Achromobacter globiforme,Conn Bacterium globiforme;

Arthrobacter globiformis  (Conn 1928) Conn and Dimmick 1947
NCBI   Euzeby
APPR:AL
LIT:Bergey vol 2,pp 1288-
TYPE:DSM 20124 ATCC 8010,NCIB 8907
ETYM:arthrus=a joint;bactrum=a rod;arthrobacter=a jointed rod
REL:Closely related to A.ramosus and A.pascens
PHY:A marked rod-coccus growth cycle occurs in complex media
RNA:[6681]
ECOL:Common in soil
IDENT:Identification difficult,PAGE,16S rRNA seq,phenotyping,CFA

Name literature references:

ND: 6681
AU:Funke G;Hutson RA;Bernard KA;Pfyffer GE;Wauters G;Collins MD;
SO:J Clin Microbiol 34:2356-2363, 1996
TI:Isolation of Arthrobacter spp. from clinical specimens and description of Arthrobacter cumminsii sp.nov. and Arthrobacter woluwensis sp.nov.
TA:Arthrobacter cumminsii;Arthrobacter woluwensis;

Strain literature References: none

Phenotypic features in COX of CCUG 581
Api CORYNE121 215 515 111 011 111 114

16S rDNA sequence in SQX of CCUG 581   FASTA
CCUG 58102
Taxon Sphingomonas paucimobilis
Seqsim 1
Seqsim 2
Seqsim 3
Litref 1
Litref 2
Litref 3
Taxrem 1
Taxrem 2
Taxrem 3
Lab S.Wernersson & S.Jensie Markopoulos,CCUG,Gbg,SE - Batch:
Date 20090524
Method 16S rRNA gene 28-456;Forward (5'->3'),16R518;
1- 50 AACGAACGCT GGCGGCATGC CTAACACATG CAAGTCGAAC GAAGGCTTCG
51- 100 GCCTTAGTGG CGCACGGGTG CGTAACGCGT GGGAATCTGC CCTTAGGTTC
101- 150 GGAATAACAG CTGGAAACGG CTGCTAATAC CGGATGATAT CGCGAGATCA
151- 200 AAGATTTATC GCCTGAGGAT GAGCCCGCGT TGGATTAGGT AGTTGGTGGG
201- 250 GTAAAGGCCT ACCAAGCCGA CGATCCATAG CTGGTCTGAG AGGATGATCA
251- 300 GCCACACTGG GACTGAGACA CGGCCCAGAC TCCTACGGGA GGCAGCAGTG
301- 350 GGGAATATTG GACAATGGGC GAAAGCCTGA TCCAGCAATG CCGCGTGAGT
351- 400 GATGAAGGCC CTAGGGTTGT AAAGCTCTTT TACCCGGGAA GATAATGA


16S rDNA sequence in SQX of CCUG 581   FASTA
CCUG 58103
Taxon Corynebacterium - novel species - Funke & Frodl 3010
Seqsim 1 100% (1041/1041) gb FJ269041 GI:209917041 Corynebacterium sp. 3010
Seqsim 2
Seqsim 3
Litref 1 Funke G;Frodl R;Ravensburg,Germany
Litref 2
Litref 3
Taxrem 1 3010 - 01-OCT-2008
Taxrem 2
Taxrem 3
Lab S.Wernersson & S.Jensie Markopoulos,CCUG,Gbg,SE - Batch:
Date 20090603
Method 16S rRNA gene 28-1095;Forward (5'->3'),16F357+16R518;
1- 50 GATGAACGCT GGCGGCGTGC TTAACACATG CAAGTCGAAC GGAAAGGCCA
51- 100 CAGCTTGCTG TGGTACTCGA GTGGCGAACG GGTGAGTAAC ACGTGGGTGA
101- 150 TCTGCCCTGT ACTTCGGGAT AAGCTTGGGA AACTGGGTCT AATACCGGAT
151- 200 AGGAATCACA TGTGGGTGTG TGGTTGGAAA GCTTTTGCGG TATGGGATGA
201- 250 GCTCGCGGCC TATCAGCTTG TTGGTGGGGT AATGGCCTAC CAAGGCGTCG
251- 300 ACGGGTAGCC GGCCTGAGAG GGTGTACGGC CACATTGGGA CTGAGATACG
301- 350 GCCCAGACTC CTACGGGAGG CAGCAGTGGG GAATATTGCA CAATGGGCGC
351- 400 AAGCCTGATG CAGCGACGCC GCGTGGGGGA TGACGGCCTT CGGGTTGTAA
401- 450 AACTCCTTTC TCAGGGACGA AGCGAAAGTG ACGGTACCTG GATAAGAAGC
451- 500 ACCGGCTAAC TACGTGCCAG CAGCCGCGGT AATACGTAGG GTGCGAGCGT
501- 550 TGTCCGGAAT TACTGGGCGT AAAGAGCTCG TAGGTGGTTT GTCGCGTCGT
551- 600 TTGTGTAAGT CCACGGCTTA ACTGTGGGAT GGCAGGCGAT ACGGGCATAA
601- 650 CTTGAGTGCT GTAGGGGAGA CTGGAATTCC TGGTGTAGCG GTGAAATGCG
651- 700 CAGATATCAG GAGGAACACC GATGGCGAAG GCAGGTCTCT GGGCAGTAAC
701- 750 TGACGCTGAG GAGCGAAAGC ATGGGTAGCG AACAGGATTA GATACCCTGG
751- 800 TAGTCCATGC CGTAAACGGT GGGCGCTAGG TGTGAGTCCC TTCCACGGGG
801- 850 TTCGTGCCGT AGCTAACGCA TTAAGCGCCC CGCCTGGGGA GTACGGCCGC
851- 900 AAGGCTAAAA CTCAAAGGAA TTGACGGGGG CCCGCACAAG CGGCGGAGCA
901- 950 TGTGGATTAA TTCGATGCAA CGCGAAGAAC CTTACCTGGG CTTGACATAC
951- 1000 ACCAGATCGG CGCAGAGATG CGTTTTCCCT TGTGGTTGGT GTACAGGTGG
1001- 1050 TGCATGGTTG TCGTCAGCTC GTGTCGTGAG ATGTTGGGTT A


16S rDNA sequence in SQX of CCUG 581   
CCUG 58136
Taxon Fibrella aestuarina
Seqsim 1
Seqsim 2 97% (1269/1300) gb DQ847437 GI:111607558 Uncultured Flexibacteraceae
Seqsim 3
Litref 1
Litref 2 Gao Z;Tseng CH;Pei Z;Blaser MJ;New York,NY;USA
Litref 3
Taxrem 1
Taxrem 2 Clone GL2-5 - 12-JUL-2006 - PNAS 104:2927-2932,2007
Taxrem 3
Lab The depositor
Date 20090511
Method 16S rRNA
1- 50 TTGATCATGG CTCAGGATGA ACGCTAGCGG CAGGCCTAAT ACATGCAAGT
51- 100 CGAGCGGGTC GCAAGACCAG CGGCAAACGG GTGCGTAACG CGTAAATAAC
101- 150 CTGCCCTCAA CTGGGAGATA GNTNGCGAAA GCGGAGGTAA TACCCCATAG
151- 200 TCTTCTTGGT CCACCTGGAC TGATTAGTAA AGCAGCAATG TGGTTGAGGA
201- 250 GGGATTTGCG TCTGATTAGT TAGTTGGCAG GGTAGTGGCC TACCAAGACG
251- 300 ATGATCAGTC GGGGCTCTGA GAGGAGGGTC CCCCACATGG GCACTGAGAC
301- 350 ACGGGCCCAA CTCCTACGGG AGGCAGCAGT AGGGAATATT GGGCAATGGG
351- 400 CGCAAGCCTG ACCCAGCCAT GCCGCGTGCC GGATGAAGGC CCTCTGGGTT
401- 450 TGTAAACGGC TTTATCTGGG AAGAAGAGCA GGGATGCGTC CCTGTGTGAC
451- 500 GGTACCAGAG GAATCAGCAC CGGCTAACTC CGTGCCAGCA GCCGCGGTAA
501- 550 TACGGAGGGT GCAAGCGTTG TCCGGATTTA TTGGGTTTAA AGGGTGCGTA
551- 600 GGTGGCCTGA TAAGTCAGCT TTGAAAGTGG CTTGCTTAAC AAGACAGGGT
601- 650 GGGTTGATAC TGTCAGGCTT GAATGGGATG GAAGGTTACT GGAACGGGTC
651- 700 GTGTAGCGGT GAAATGCATA GATATGACCC AGAACTCCAA TTGCGAAGGC
701- 750 AGGTGGCTAC ATCCCGATTG ACACTGAGGC ACGAGAGCAT GGGGAGCAAA
751- 800 CAGGATTAGA TACCCTGGTA GTCCATGCCG TAAACGATGA TAACTGACTG
801- 850 TTTGGCTTTC GGGCTGAGTG GTTAAGCGAA AGCGTTAAGT TATCCACCTG
851- 900 GGGAGTACGC CGGCAACGGT GAAACTCAAA GGAATTGACG GGGGTCCGCA
901- 950 CAAGCGGTGG AGCATGTGGT TTAATTCGAT GATACGCGAG GAACCTTACC
951- 1000 CGGATTAGAA TGCGCGTGAA GGGCTTGGAG ACAGGTCCGT CTAGCAATAG
1001- 1050 ACACAAAGCA AGGTGCTGCA TGGCTGTCGT CAGCTCGTGC CGTGAGGTGT
1051- 1100 TGGGTTAAGT CCCGCAACGA GCGCAACCCC TGGAATCAGT TGCCAGCACG
1101- 1150 TCAAGGTGGG GACTCTGGTT CGACTGCCTG CGCAAGCAGA GAGGAAGGCG
1151- 1200 GGGACGACGT CAAGTCATCA TGGCCCTTAC ATCCGGGCGA CACACGTGCT
1201- 1250 ACAATGGCCG GTACAGCGGG TCACGATCCC GCAAGGGGGA GTCAATCTCA
1251- 1300 GCAAAGCCGG TCACAGTTCG GATTGGGGTC TGCAACTCGA CCCCATGAAG
1301- 1350 CTGGAATCGC TAGTAATCG


16S rDNA sequence in SQX of CCUG 581   
CCUG 58136 b
Taxon Fibrella aestuarina
Seqsim 1
Seqsim 2
Seqsim 3
Litref 1
Litref 2
Litref 3
Taxrem 1
Taxrem 2
Taxrem 3
Lab S.Wernersson & S.Jensie Markopoulos,CCUG,Gbg,SE - Batch:
Date 20090709
Method 16S rRNA gene xx-xxxx;Forward (5'->3'),16F357+16R518;
1- 50 TGAACGCTAG CGGCAGGCCT AATACATGCA AGTCGAGCGG GTCGCAAGAC
51- 100 CAGCGGCAAA CGGGTGCGTA ACGCGTAAAT AACCTGCCCT CAACTGGGAG
101- 150 ATAGCTTTGC GAAAGCGGAG GTAATACCCC ATAGTCTTCT TGGTCCACCT
151- 200 GGACTGATTA GTAAAGCAGC AATGTGGTTG AGGAGGGATT TGCGTCTGAT
201- 250 TAGTTAGTTG GCAGGGTAGT GGCCTACCAA GACGATGATC AGTCGGGGCT
251- 300 CTGAGAGGAG GGTCCCCCAC ATGGGCACTG AGACACGGGC CCAACTCCTA
301- 350 CGGGAGGCAG CAGTAGGGAA TATTGGGCAA TGGGCGCAAG CCTGACCCAG
351- 400 CCATGCCGCG TGCCGGATGA AGGCCCTCTG GGTTGTAAAC GGCTTTTATC
401- 450 CTGGGAAGAA AGCAGGGATG CGTCCCTGTG TGA


16S rDNA sequence in SQX of CCUG 581   FASTA
CCUG 58137
Taxon Flexibacteraceae
Seqsim 1
Seqsim 2 89% (1246/1391) gb EU370956 GI:165909659 Spirosoma panaciterrae
Seqsim 3
Litref 1
Litref 2 Im W-T;Xu J-L;Lee S-T;Daejeon,Korea
Litref 3
Taxrem 1
Taxrem 2 BR7-21 - 02-JAN-2008 -
Taxrem 3
Lab The depositor
Date 20090511
Method 16S rRNA
1- 50 TAGAGGTTTG ATCATGGCTC AGGATGAACG CTAGCGGCAG GCCTAATACA
51- 100 TGCAAGTCGA GCGGGCAGCA ATGCCAGCGG CAAACGGGTG CGTAACGCGT
101- 150 AAACAACCTG CCCCGGATTG GGGGATAGCC CGGCGAAAGC TGGGGTAAAC
151- 200 CCGCATGGTG CTAATGGGTG GCATCACTGA TTAGCTAAAT ATTTATAGAT
201- 250 CCGGGAGGGG TTTGCGTCTG ATTAGCTGGA TGGTGGGGTA ACGGCCTACC
251- 300 ATGGCCATGA TCAGTAGGGG TTCTGAGAGG ATTGGCCCCC ACACGGGTAC
301- 350 TGAGAGACGG ACCCGACTCC TACGGGAGGC AGCAGTAGGG AATATTGGGC
351- 400 AATGGAGGCA ACTCTGACCC AGCCATGCCG CGTGCAGGAC GAAGGCGCTC
401- 450 CAGCGTTGTA ACTGCTTTTG CCCGTGAAGA AACGCAGCCC TGCGGGGTTG
451- 500 TTTGCCGGTA ACGGGTGAAT AAGCACCGGC TAACTCCGTG CCAGCAGCCG
501- 550 CGGTAATACG GAGGGTGCAA GCGTTGTCCG GATTTATTGG GTTTAAAGGG
551- 600 TGCGTAGGTG GTCCTGTAAG TCTGGTTTGA AAGCTGGGTG CTCAACACTC
601- 650 AGATGTGGCT GGATACTGTG GGACTTGAAT GAACTGGAGG TCACTGGAAC
651- 700 GGGTCATGTA GCGGTGAAAT GCATAGATAT GACCCAGAAC CCCGATTGCG
701- 750 TAGGCAGGTG ACTACGGTTT GATTGACACT GAGGCACGAG AGCATGGGGA
751- 800 GCGAACAGGA TTAGATACCC TGGTAGTCCA TGCCGTAAAC GATGATGACT
801- 850 GGCTGTTGGG TCTTTGGACT CAGTGGCTGA GCGAAAGCGT TAAGTCATCC
851- 900 ACCTGGGGAG TACGCCGGCA ACGGTGAAAC TCAAAGGAAT TGACGGGGGT
901- 950 CCGCACAAGC GGTGGAGCAT GTGGTTTAAT TCGATGATAC GCGAGGAACC
951- 1000 TTACCTGGGC TAGAATGCGC GTGAAGTGGG TGGAAACATC CGCGCCCCGC
1001- 1050 AAGGGGCACA AAGCAAGGTG CTGCATGGCT GTCGTCAGCT CGTGCCGTGA
1051- 1100 GGTGTTGGGT TAAGTCCCGC AACGAGCGCA ACCCTTATCG TATGTTGCCA
1101- 1150 GCACGTAATG GTGGGGACTC ATGCGAGACT GCCTGCGCAA GCAGAGAGGA
1151- 1200 AGGGGGGGAC GACGTCAAGT CATCATGGCC CTTACGTCCA GGGCGACACA
1201- 1250 CGTGCTACAA TGGTCGGTAC AGCGGGTCAC GATGGGGCAA CCCTGAGTCA
1251- 1300 ATCTTGCAAA GCCGGTCACA GTTCGGATTG GGGTCTGCAA CCCGACCCCA
1301- 1350 TGAAGCTGGA ATCGCTAGTA ATCGCGCATC AGCCATGGCG CGGTGAATAC
1351- 1400 GTTCCCGGAC CTTGTACACA CCGCCCGTCA AGCCATGGAG TTGGGGGACC
1401- 1450 TGAAGTTCGG GTACACCGAC AGGTAAACCG


16S rDNA sequence in SQX of CCUG 581   
CCUG 58137 b
Taxon Flexibacteraceae
Seqsim 1
Seqsim 2
Seqsim 3
Litref 1
Litref 2
Litref 3
Taxrem 1
Taxrem 2
Taxrem 3
Lab S.Wernersson & S.Jensie Markopoulos,CCUG,Gbg,SE - Batch:
Date 20090618
Method 16S rRNA gene 28-472;Forward (5'->3'),16R518;
1- 50 GATGAACGCT AGCGGCAGGC CTAATACATG CAAGTCGAGC GGGCAGCAAT
51- 100 GCCAGCGGCA AACGGGTGCG TAACGCGTAA ACAACCTGCC CCGGATTGGG
101- 150 GGATAGCCCG GCGAAAGCTG GGGTAAACCC GCATGGTGCT AATGGGTGGC
151- 200 ATCACTGATT AGCTAAATAT TTATAGATCC GGGAGGGGTT TGCGTCTGAT
201- 250 TAGCTGGATG GTGGGGTAAC GGCCTACCAT GGCCATGATC AGTAGGGGTT
251- 300 CTGAGAGGAT TGGCCCCCAC ACGGGTACTG AGAGACGGAC CCGACTCCTA
301- 350 CGGGAGGCAG CAGTAGGGAA TATTGGGCAA TGGAGGCAAC TCTGACCCAG
351- 400 CCATGCCGCG TGCAGGACGA AGGCGCTCAG CGTTGTAAAC TGCTTTTGCC
401- 450 CCGTGAAGAA CGCAGCCCTG CGGGGT


16S rDNA sequence in SQX of CCUG 581   
CCUG 58142
Taxon Pseudoclavibacter chungangensis
Seqsim 1 100% (1424/1424) gb FJ514934 GI:219870165 Pseudoclavibacter chung...
Seqsim 2 97% (1387/1424) gb EU086820 GI:158905557 Pseudoclavibacter G665
Seqsim 3 96% (1375/1424) emb X77440 GI:516325 Pseudoclavibacter helvolus
Litref 1 Cho SL;Kim WY;Seoul,South Korea
Litref 2 Mages IS;Frodl R;Bernard KA;Funke G;Ravensburg,Germany
Litref 3 Rainey FA;Weiss N;Prauser H;Stackebrandt E;Braunschweig,Germany
Taxrem 1 CAU 59 = CCUG 58142 - 01-DEC-2008 - IJSEM 60 1672-1677,2009 [25348]
Taxrem 2 G665 - 08-AUG-2007 - J Clin Microbiol 46:2980-2986,2008 [25195]
Taxrem 3 DSM 20419 CCUG 43303T - 31-JAN-1994 - FEMS ML 118:135,1994 [18186]
Lab NCBI Entrez
Date 20090511
Method 16S rRNA
1- 50 ccatgcaagt cgaacgatga tgctggagct tgctctggtg gattagtggc
51- 100 gaacgggtga gtaacacgtg agcaacgtgc ccttgactct ggaataactt
101- 150 cgggaaatcg gagctaatac tggatatgag atgcggccgc atggtctgtg
151- 200 tctggaaaga tttatcggtt ggggatcggc tcacggccta tcagcttgtt
201- 250 ggtgaggtaa tggctcacca aggcgacgac gggtagccgg cctgagaggg
251- 300 tgaccggcca cactgggact gagacacggc ccagactcct acgggaggca
301- 350 gcagtgggga atattgcaca atgggcgcaa gcctgatgca gcaacgccgc
351- 400 gtgagggatg acggccttcg ggttgtaaac ctcttttggc agggaagaag
401- 450 gcgaaagtga ggtacctgca gaaaaagcac cggctaacta cgtgccagca
451- 500 gccgcggtaa tacgtagggt gcaagcgttg tccggaatta ttgggcgtaa
501- 550 agagctcgta ggcggtttgt cgcgtctgct gtgaaatccc gaggctcaac
551- 600 ctcgggcctg cagtgggtac gggcagacta gagtgcggta ggggagattg
601- 650 gaattcctgg tgtagcggtg gaatgcgcag atatcaggag gaacaccgat
651- 700 ggcgaaggca gatctctggg ccgctactga cgctgaggag cgaaagcatg
701- 750 gggagcgaac aggattagat accctggtag tccatgccgt aaacgttggg
751- 800 cgctagatgt ggggaccatt ctacggtttc cgtgtcgtag ctaacgcatt
801- 850 aagcgccccg cctggggagt acggccgcaa ggctaaaact caaaggaatt
851- 900 gacgggggcc cgcacaagcg gcggagcatg cggattaatt cgatgcaacg
901- 950 cgaagaacct taccaaggct tgacatatac cggaaacggc cagagatggt
951- 1000 cgccccgcaa ggtcggtata caggtggtgc atggttgtcg tcagctcgtg
1001- 1050 tcgtgagatg ttgggttaag tcccgcaacg agcgcaaccc tcgtcgtatg
1051- 1100 ttgccagcac gttatggtgg gaactcatat gagactgccg gggtcaactc
1101- 1150 ggaggaaggt ggggatgacg tcaaatcatc atgcccctta tgtcttgggc
1151- 1200 ttcacgcatg ctacaatggc tggtacaaag ggctgcgata ccgcgaggtg
1201- 1250 gagcgaatcc caaaaagcca gtctcagttc ggattggggt ctgcaactcg
1251- 1300 accccatgaa gtcggagtcg ctagtaatcg cagatcagca acgctgcggt
1301- 1350 gaatacgttc ccgggccttg tacacaccgc ccgtcaagtc atgaaagtcg
1351- 1400 gtaacacccg aagccggtgg cccaaccttt tggagggagc cgtcgaaggt
1401- 1450 gggattcggt gataggacta agtc


ND: 25348
AU:Cho SL;Jung MY;Park M-H;Chang Y-H;Yoon J-H;Myung SC;Kim WY;
SO:Int J Syst Evol Microbiol 60:1672-1677, 2010
TI:Pseudoclavibacter chungangensis sp. nov., isolated from activated sludge
AB:Type strain: CAU 59 = CCUG 58142 KCTC 22691 FJ514934 http://ijs.sgmjournals.org/cgi/reprint/60/7/1672.pdf
TA:Pseudoclavibacter chungangensis

ND: 25195
AU:Mages IS;Frodl R;Bernard KA;Funke G;
SO:J Clin Microbiol 46:2980-2986, 2008
TI:Identities of Arthrobacter spp. and Arthrobacter-like bacteria encountered in human clinical specimens
AB:Type strain of A.s. is CCUG 46407 Funke 741 = DSM 21259 Type strain of B.r. is Funke 20 = CCUG 56047 DSM 21258 http://jcm.asm.org/cgi/reprint/46/9/2980
TA:Arthrobacter sanguinis;Brevibacterium ravenspurgense;Pseudoclavibacter;

ND: 18186
AU:Manaia CM;Nogales B;Weiss N;Nunes OC;
SO:Int J Syst Evol Microbiol 54: 783-789, 2004
TI:Gulosibacter molinativorax gen. nov., sp. nov., a molinate-degrading bacterium, and classification of 'Brevibacterium helvolum' DSM 20419 as Pseudoclavibacter helvolus gen. nov., sp. nov
AB: Publ. 28 Nov 2003:http://www.sgm.ac.uk/IJSEM/PiP/ijsem02851.pdf http://ijs.sgmjournals.org/cgi/reprint/54/3/783.pdf
TA:Gulosibacter molinativorax;Brevibacterium helvolum;Pseudoclavibacter helvolus;

16S rDNA sequence in SQX of CCUG 581   FASTA
CCUG 58157
Taxon Haemophilus parainfluenzae
Seqsim 1
Seqsim 2
Seqsim 3
Litref 1
Litref 2
Litref 3
Taxrem 1
Taxrem 2
Taxrem 3
Lab S.Wernersson & S.Jensie Markopoulos,CCUG,Gbg,SE
Date 20090525
Method 16S rRNA gene 28-1007;Forward (5'->3'),16F357+16R518;
1- 50 ATTGAACGCT GGCGGCAGGC TTAACACATG CAAGTCGAAC GGTAACATAA
51- 100 AGAAGCTTGC TTCTTTGATG ACGAGTGGCG GACGGGTGAG TAATGCTTGG
101- 150 GAATCTAGCT TATGGAGGGG GATAACTACG GGAAACTGTA GCTAATACCG
151- 200 CGTAATATCG AAAGATTAAA GTGTGGGACC TTCGGGCCAC ATGCCATAGG
201- 250 ATGAGCCCAA GTGGGATTAG GTAGTTGGTG AGGTAAAGGC TCACCAAGCC
251- 300 GACGATCTCT AGCTGGTCTG AGAGGATGAC CAGCCACACT GGGACTGAGA
301- 350 CACGGCCCAG ACTCCTACGG GAGGCAGCAG TGGGGAATAT TGCGCAATGG
351- 400 GGGCAACCCT GACGCAGCCA TGCCGCGTGA ATGAAGAAGG CCTTCGGGTT
401- 450 TGTAAAGTTC TTCGGTAGCG AGGAAGGCAT TTAGTTTAAT AGACTAGRTG
451- 500 ATTGACGTTA ACTACAGAAG AAGCACCGGC TAACTCCGTG CCAGCAGCCG
501- 550 CGGTAATACG GAGGGTGCGA GCGTTAATCG GAATAACTGG GCGTAAAGGG
551- 600 CACGCAGGCG GASTTTTAAG TGAGGTGTGA AAGCCCCGGG CTTAACCTGG
601- 650 GAATTGCATT TCAKACTGGG ASTCTAGAGT ACTTTAGGGA GGGGTAGAAT
651- 700 TCCACGTGTA GCGGTGAAAT GCGTAGAGAT GTGGAGGAAT ACCGAAGGCG
701- 750 AAGGCAGCCC CTTGGGAATG TACTGACGCT CATGTGCGAA AGCGTGGGGA
751- 800 GCAAACAGGA TTAGATACCC TGGTAGTCCA CGCTGTAAAC GATGTCGATT
801- 850 TGGGGGTTGA ACTTTAAGTT TGGCGCCCGT AGCTAACGTG ATAAATCGAC
851- 900 CGCCTGGGGA GTACGGCCGC AAGGTTAAAA CTCAAATGAA TTGACGGGGG
901- 950 CCCGCACAAG CGGTGGAGCA TGTGGTTTAA TTCGATGCAA CGCGAAGAAC
951- 1000 CTTACCTACT CTTGACATCC AGAGAACT


16S rDNA sequence in SQX of CCUG 581   
CCUG 58170
Taxon Corynebacterium parvulum
Seqsim 1 98% (419/424) gb GQ149125 GI:239909265 Corynebacterium sp. 1119
Seqsim 2 99% (421/424) gb AY581886 GI:50898060 Corynebacterium sp. 31595
Seqsim 3 99% (415/419) gb FJ185225 GI:223951463 Corynebacterium sp. 06-17730
Litref 1 Funke G;Frodl R;Ravensburg,Germany
Litref 2 Khamis A;Raoult D;La Scola B;Marseille,France
Litref 3 Tong J;Liu C;Xu H;Finegold SM;Los Angeles,CA,USA
Taxrem 1 1119 = CCUG 58170 - 12-MAY-2009 - IJSEM 59 xxxx-xxxx,2009 [25378]
Taxrem 2 31595 = CCUG 49272 - 24-MAR-2004 - JCM 43 1934-1936,2005 [22014]
Taxrem 3 06-17730 = CCUG 57046 - 04-SEP-2008 - IJSEM 59 xxxx,2009 [25293]
Lab S.Wernersson & S.Jensie Markopoulos,CCUG,Gbg,SE - Batch:
Date 20090716
Method 16S rRNA gene xx-xxxx;Forward (5'->3'),16R518;
1- 50 GATGAACGCT GGCGGCGTGC TTAACACATG CAAGTCGAAC GGAAAGGCCT
51- 100 CAGCTTGCTG GGGTGCTCGA GTGGCGAACG GGTGAGTAAC ACGTAGGTGA
101- 150 TCTGCCTTTC ACTTCGGGAT AAGCTTGGGA AACTGGGTCT AATACCGGAT
151- 200 ATTCACGGCA CCGTGGTTGG TGTGGTGGAA AGCTTTTGCG GTGGGAGATG
201- 250 AGCTTGCGGC CTATCAGCTT GTTGGTGGGG TAATGGCCTA CCAAGGCGGC
251- 300 GACGGGTAGC CGGCCTGAGA GGGTGTGCGG CCACATTGGG ACTGAGATAC
301- 350 GGCCCAGACT CCTACGGGAG GCAGCAGTGG GGAATTTTGC ACAATGGGCG
351- 400 GAAGCCTGAT GCAGCGACGC CGTGTGGGGG ATGAAGGCCT TCGGGTTGTA
401- 450 AAACTCCTTT GTCAGGGACG AAGT


ND: 22014
AU:Khamis A;Raoult D;La Scola B;
SO:J Clin Microbiol 43:1934-1936, 2005
TI:Comparison between rpoB and 16S rRNA gene sequencing for molecular identification of 168 clinical isolates of Corynebacterium
AB: http://jcm.asm.org/cgi/reprint/43/4/1934
TA:Corynebacterium;

ND: 25293
AU:Tong J;Liu C;Summanen P;Xu H;Finegold SM;
SO:Int J Syst Evol Microbiol 60:1135-1140, 2010
TI:Corynebacterium pyruviciproducens sp. nov., a pyruvic acid producer
AB:Type strain is WAL 19168 = CCUG 57046 ATCC BAA-1742 GenBank FJ185225 strain 06-1773C) http://ijs.sgmjournals.org/cgi/reprint/60/5/1135.pdf
TA:Corynebacterium pyruviciproducens

16S rDNA sequence in SQX of CCUG 581   FASTA
CCUG 58188
Taxon Staphylococcus simulans
Seqsim 1
Seqsim 2
Seqsim 3
Litref 1
Litref 2
Litref 3
Taxrem 1
Taxrem 2
Taxrem 3
Lab S.Wernersson & S.Jensie Markopoulos,CCUG,Gbg,SE - Batch:
Date 20090608
Method 16S rRNA gene 30-974;Forward (5'->3'),16F357+16R518;
1- 50 GAACGCTGGC GGCGTGCCTA ATACATGCAA GTCGAGCGAA CAGACGAGGA
51- 100 GCTTGCTCCT CTGACGTTAG CGGCGGACGG GTGAGTAACA CGTGGGTAAC
101- 150 CTACCTATAA GACTGGGATA ACTCCGGGAA ACCGGGGCTA ATACCGGATA
151- 200 ACACATGAAA CCGCATGGTT TCATGATGAA AGACGGTTTT GCTGTCACTT
201- 250 ATAGATGGAC CCGCGGCGTA TTAGCTAGTT GGTAAGGTAA CGGCTTACCA
251- 300 AGGCAACGAT ACGTAGCCGA CCTGAGAGGG TGATCGGCCA CACTGGAACT
301- 350 GAGACACGGT CCAGACTCCT ACGGGAGGCA GCAGTAGGGA ATCTTCCGCA
351- 400 ATGGGCGAAA GCCTGACGGA GCAACGCCGC GTGAGTGATG AAGGTCTTCG
401- 450 GGATCGTAAA CTCTGTTATT AGGGAAGAAC AAGGATGTAA GTAACTATGC
451- 500 ATCCCTTGAC GGTACCTAAT CAGAAAGCCA CGGCTAACTA CGTGCCAGCA
501- 550 GCCGCGGTAA TACGTAGGTG GCAAGCGTTA TCCGGAATTA TTGGGCGTAA
551- 600 AGCGCGCGTA GGCGGTTTTT TAAGTCTGAT GTGAAAGCCC ACGGCTCAAC
601- 650 CGTGGAGGGT CATTGGAAAC TGGAAAACTT GAGTGCAGAA GAGGAAAGTG
651- 700 GAATTCCATG TGTAGCGGTG AAATGCGCAG AGATATGGAG GAACACCAGT
701- 750 GGCGAAGGCG ACTTTCTGGT CTGCAACTGA CGCTGATGTG CGAAAGCGTG
751- 800 GGGATCAAAC AGGATTAGAT ACCCTGGTAG TCCACGCCGT AAACGATGAG
801- 850 TGCTAAGGTG TTAGGGGGTT TCCGCCCCTT AGTGCTGCAG CTAACGCATT
851- 900 AAGCACTCCG CCTGGGGAGT ACGGCCGCAA GGCTGAAACT CAAAGGAATT
901- 950 GACGGGGACC CGCACAAGCG GTGGAGCATG TGGTTTAATT C


16S rDNA sequence in SQX of CCUG 581   FASTA
CCUG 58194
Taxon Staphylococcus hominis
Seqsim 1
Seqsim 2
Seqsim 3
Litref 1
Litref 2
Litref 3
Taxrem 1
Taxrem 2
Taxrem 3
Lab S.Wernersson & S.Jensie Markopoulos,CCUG,Gbg,SE - Batch:
Date 20090608
Method 16S rRNA gene 28-969;Forward (5'->3'),16F357+16R518;
1- 50 GATGAACGCT GGCGGCGTGC CTAATACATG CAAGTCGAGC GAACAGACGA
51- 100 GGAGCTTGCT CCTTTGACGT TAGCGGCGGA CGGGTGAGTA ACACGTAGGT
101- 150 AACCTACCTA TAAGACTGGG ATAACTTCGG GAAACCGGAG CTAATACCGG
151- 200 ATAATATTTC GAACCGCATG GTTCGATAGT GAAAGATGGC TTTGCTATCA
201- 250 CTTATAGATG GACCTGCGCC GTATTAGCTA GTTGGTAAGG TAACGGCTTA
251- 300 CCAAGGCAAC GATACGTAGC CGACCTGAGA GGGTGATCGG CCACACTGGA
301- 350 ACTGAGACAC GGTCCAGACT CCTACGGGAG GCAGCAGTAG GGAATCTTCC
351- 400 GCAATGGGCG AAAGCCTGAC GGAGCAACGC CGCGTGAGTG ATGAAGGTCT
401- 450 TTCGGATCGT AAACTCTGTT ATTAGGGAAG AACAAACGTG TAAGTAACTG
451- 500 TGCACGTCTT GACGGTACCT AATCAGAAAG CCACGGCTAA CTACGTGCCA
501- 550 GCAGCCGCGG TAATACGTAG GTGGCAAGCG TTATCCGGAA TTATTGGGCG
551- 600 TAAAGCGCGC GTAGGCGGTT TTTTAAGTCT GATGTGAAAG CCCACGGCTC
601- 650 AACCGTGGAG GGTCATTGGA AACTGGAAAA CTTGAGTGCA GAAGAGGAAA
651- 700 GTGGAATTCC ATGTGTAGCG GTGAAATGCG CAGAGATATG GAGGAACACC
701- 750 AGTGGCGAAG GCGACTTTCT GGTCTGTAAC TGACGCTGAT GTGCGAAAGC
751- 800 GTGGGGATCA AACAGGATTA GATACCCTGG TAGTCCACGC CGTAAACGAT
801- 850 GAGTGCTAAG TGTTAGGGGG TTTCCGCCCC TTAGTGCTGC AGCTAACGCA
851- 900 TTAAGCACTC CGCCTGGGGA GTACGACCGC AAGGTTGAAA CTCAAAGGAA
901- 950 TTGACGGGGA CCCGCACAAG CGGTGGAGCA TGTGGTTTA


16S rDNA sequence in SQX of CCUG 581   FASTA
CCUG 58194 d
Taxon Staphylococcus hominis
Seqsim 1
Seqsim 2
Seqsim 3
Litref 1
Litref 2
Litref 3
Taxrem 1
Taxrem 2
Taxrem 3
Lab S.Wernersson & S.Jensie Markopoulos,CCUG,Gbg,SE - Batch:
Date 20090608
Method sodA - Strep SodA-F,Strep SodA-R
1- 50 AACACTTATG TTACAAAATT AAATTCTGCA GTTGAAGGTA CTGATTTAGA
51- 100 ATCTAAATCA ATTGAAGAAA TTGTTGCAAA TTTAGATAGT GTACCTGAAA
101- 150 ATATTCAAAC AGCAGTACGT AATAATGGTG GAGGTCATTT AAATCACTCA
151- 200 TTATTCTGGG AATTATTAAC TCCTAATTCT GAAGAAAAAG GTACTGTAAT
201- 250 TGATAAAATT AAAGAACAAT GGGGTTCTTT AGATGAGTTT AAAAAAGAAT
251- 300 TCGCTGATAA AGCTGCAGCA CGTTTTGGTT CAGGTTGGGC TTGGTTAGTA
301- 350 GTAAATAATG GAAAATTAGA AATTGTTACT ACTCCAAATC AAGATAACCC
351- 400 TATTACTGAA GGAAAAACTC CAATTTTAGG CTTA


16S rDNA sequence in SQX of CCUG 581   FASTA
CCUG 58196
Taxon Bacillus psychrodurans group
Seqsim 1 100% (820/820) gb EU399813 GI:166203556 Bacillus sp. 05
Seqsim 2
Seqsim 3
Litref 1 Novak J;Prouza M;Tykva R;Vlasakova V;Wimmer Z;Havlicek L;Prague,CZ
Litref 2
Litref 3
Taxrem 1 05 - 11-JAN-2008 - J Agric Food Chem 56:6604-6608,2008
Taxrem 2
Taxrem 3
Lab S.Wernersson & S.Jensie Markopoulos,CCUG,Gbg,SE - Batch:
Date 20090623
Method 16S rRNA gene 213-1034;Forward (5'->3'),16F357+16R518;
1- 50 GCTGTCACTA CAGGATGGGC CCGCGGCGCA TTAGCTAGTT GGTGAGGTAA
51- 100 CGGCTCACCA AGGCGACGAT GCGTAGCCGA CCTGAGAGGG TGATCGGCCA
101- 150 CACTGGGACT GAGACACGGC CCAGACTCCT ACGGGAGGCA GCAGTAGGGA
151- 200 ATCTTCCACA ATGGACGAAA GTCTGATGGA GCAACGCCGC GTGAGTGAAG
201- 250 AAGGTTTTCG GATCGTAAAA CTCTGTTGTG AGGGAAGAAC AAGTACGAGA
251- 300 GTAACTGCTC GTACCTTGAC GGTACCTCAT TAGAAAGCCA CGGCTAACTA
301- 350 CGTGCCAGCA GCCGCGGTAA TACGTAGGTG GCAAGCGTTG TCCGGAATTA
351- 400 TTGGGCGTAA AGCGCGCGCA GGCGGTCCTT TAAGTCTGAT GTGAAAGCCC
401- 450 CACGGCTCAA CGTGGAGGGT CATTGGAAAC TGGGGGACTT GAGTGCAGAA
451- 500 GAGGAAAGTG GAATTCCAAG TGTAGCGGTG AAATGCGTAG AGATTTGGAG
501- 550 GAACACCAGT GGCGAAGGCG ACTTTCTGGT CTGTAACTGA CGCTGAGGCG
551- 600 CGAAAGCGTG GGGAGCAAAC AGGATTAGAT ACCCTGGTAG TCCACGCCGT
601- 650 AAACGATGAG TGCTAAGTGT TAGGGGGTTT CCGCCCCTTA GTGCTGCAGC
651- 700 TAACGCATTA AGCACTCCGC CTGGGGAGTA CGGTCGCAAG ACTGAAACTC
701- 750 AAAGGAATTG ACGGGGGCCC GCACAAGCGG TGGAGCATGT GGTTTAATTC
751- 800 GAAGCAACGC GAAGAACCTT ACCAGGTCTT GACATCCCGC TGACCGTCCT
801- 850 AGAGATAGGA TTTTCCCTTC


16S rDNA sequence in SQX of CCUG 581   
CCUG 58199
Taxon Acinetobacter radioresistens
Seqsim 1
Seqsim 2
Seqsim 3
Litref 1
Litref 2
Litref 3
Taxrem 1
Taxrem 2
Taxrem 3
Lab S.Wernersson & S.Jensie Markopoulos,CCUG,Gbg,SE - Batch:
Date 20090629
Method 16S rRNA gene xx-xxxx;Forward (5'->3'),16F357+16R518+16R806;
1- 50 CGCTGGCGGC AGGCTTAACA CATGCGAAGT CGAGCRGATG AAAAGTAGCT
51- 100 TGCTACCGGA TTCAGCGGCG GACGGGTGAG TAATGCTTAG GAAWTCTGCC
101- 150 TATTAGTGGG GGACAACGTT CCGAAAAGGA GCGCTAATAC CGCATACGTC
151- 200 CTACGGGAGA AAGCARGRRA CCTTCGGGCC TTGCGCTAAT AGATGAGCCT
201- 250 AAGTCGGATT AGCTAGTTGG TAGGGTAAAG GCCTACCAAG GCGACGATCT
251- 300 GTAGCGGGTC TGAGAGGATG ATCCGCCACA CTGGGACTGA GACACGGCCC
301- 350 AGACTCCTAC GGGAGGCAGC AGTGGGGAAT ATTGGACAAT GGGGGGAACC
351- 400 CTGATCCAGC CATGCCGCGT GTGTGAAGAA GGCCTTTTGG TTGTAAAGCA
401- 450 ACTTTAAGCG GGAGGAGGCT ACCTAGATTA ATACTTTAGG ATAGTGGACG
451- 500 TACTCGCAGA ATAAGCACCG GCAAC


CCUG - Fatty Acid profile - CFA(FAME)  
-------------------------------------------------------------------------------------------------------------------
Strain : CCUG 581 T Taxon : Arthrobacter globiformis
Date:910124 11:30:35
Remarks:ARTHROBACTER GLOBIFORMIS CCUG 581
-------------------------------------------------------------------------------------------------------------------
PEAK RT   ECL     %   Abbreviation Fatty Acid
038 6.826   13.618   2.4   14:0 ISO
046 7.353   14.000   3.2   14:0
047 7.523   14.110   1.1   13:0 ISO 3OH
053 7.995   14.414   1.1   15:1 ISO F
059 8.316   14.621   6.9   15:0 ISO
060 8.455   14.711   54.4   15:0 ANTEISO
073 9.676   15.461   1.2   16:1 ISO H
077 9.953   15.626   8.1   16:0 ISO
082 10.276   15.819   1.7   16:1 w7c
086 10.580   16.000   5.9   16:0
098 11.492   16.525   1.2   17:1 w9c ANTEISO
102 11.834   16.722   7.7   17:0 ANTEISO
126 13.675   17.769   1.2   18:1 w9c
127 13.772   17.824   1.9   18:1 w7c /12t/9t
131 14.083   18.000   2.0   18:0
-------------------------------------------------------------------------------------------------------------------
Sum:         100  
-------------------------------------------------------------------------------------------------------------------
 
CCUG, Department of Clinical Bacteriology
Curator: Prof. Dr. E.R.B. Moore
University of Göteborg, Mikrobiologen,
Guldhedsgatan 10, SE-413 46 Göteborg
Box 7193, SE-402 34 Göteborg, Sweden
Org.no./VAT no.:SE 202 100 315 301 		Orders:
E.R.B.Moore:
Enquiries:
Lab@ccug.se
E. Falsen:
 order@domain
curator@domain
info@domain
lab@domain


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Tel curator:
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